Installation

BooLEVARD is a Python package designed to compute the number of paths leading to node activations or inactivations in Boolean models.

Features

  • Import Boolean models in .bnet format.

  • Compute the number of paths leading to the local states of a list of nodes.

  • Perform model perturbations.

  • Export back models to .bnet format.

Instalation from PyPI

To install BooLEVARD from PyPi, install the main package using pip:

pip install boolevard

The dependencies can be installed by running the following code:

pip install -r https://raw.githubusercontent.com/farinasm/boolevard/main/requirements.txt

Installation with conda

To install BooLEVARD using conda, install the main package using conda:

conda install farinasm::boolevard

Installation from source

To install the latest development version, BooLEVARD can also be installed from the source:

git clone https://github.com/farinasm/boolevard.git
cd boolevard
pip install .
pip install -r requirements.txt